Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.81■□□□□ 0.12
GFRA3O60609 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GFRA3O60609 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA3O60609 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA3O60609 HOMER2P2-201ENST00000451621 847 ntBASIC15.81■□□□□ 0.12
GFRA3O60609 RPL13AP25-201ENST00000484130 612 ntBASIC15.81■□□□□ 0.12
GFRA3O60609 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GFRA3O60609 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.81■□□□□ 0.12
GFRA3O60609 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA3O60609 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
GFRA3O60609 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GFRA3O60609 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 AP001063.1-201ENST00000568332 529 ntBASIC15.81■□□□□ 0.12
GFRA3O60609 AC061975.2-201ENST00000581722 295 ntBASIC15.81■□□□□ 0.12
GFRA3O60609 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA3O60609 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA3O60609 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.81■□□□□ 0.12
GFRA3O60609 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.81■□□□□ 0.12
GFRA3O60609 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.81■□□□□ 0.12
GFRA3O60609 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GFRA3O60609 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GFRA3O60609 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.8■□□□□ 0.12
GFRA3O60609 AC015818.8-201ENST00000587907 1519 ntBASIC15.8■□□□□ 0.12
GFRA3O60609 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 KRT8P49-201ENST00000604166 1432 ntBASIC15.8■□□□□ 0.12
GFRA3O60609 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 C1QBPP1-201ENST00000400117 770 ntBASIC15.8■□□□□ 0.12
GFRA3O60609 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.8■□□□□ 0.12
GFRA3O60609 Z97180.1-201ENST00000445173 988 ntBASIC15.8■□□□□ 0.12
GFRA3O60609 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.8■□□□□ 0.12
GFRA3O60609 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
GFRA3O60609 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.8■□□□□ 0.12
GFRA3O60609 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 AC005357.2-202ENST00000590507 1060 ntBASIC15.8■□□□□ 0.12
GFRA3O60609 AL096828.3-201ENST00000615354 462 ntBASIC15.8■□□□□ 0.12
GFRA3O60609 MIR6756-201ENST00000616240 63 ntBASIC15.8■□□□□ 0.12
GFRA3O60609 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GFRA3O60609 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GFRA3O60609 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA3O60609 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA3O60609 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
GFRA3O60609 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.79■□□□□ 0.12
GFRA3O60609 AP000997.3-201ENST00000623333 2250 ntBASIC15.79■□□□□ 0.12
GFRA3O60609 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GFRA3O60609 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.79■□□□□ 0.12
GFRA3O60609 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.79■□□□□ 0.12
GFRA3O60609 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 AL021920.2-201ENST00000624828 1351 ntBASIC15.79■□□□□ 0.12
GFRA3O60609 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GFRA3O60609 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
GFRA3O60609 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GFRA3O60609 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.79■□□□□ 0.12
GFRA3O60609 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.79■□□□□ 0.12
GFRA3O60609 AC093433.1-201ENST00000458048 571 ntBASIC15.79■□□□□ 0.12
GFRA3O60609 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.79■□□□□ 0.12
GFRA3O60609 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.79■□□□□ 0.12
GFRA3O60609 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
GFRA3O60609 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.79■□□□□ 0.12
GFRA3O60609 GNRHR2-203ENST00000581100 1187 ntBASIC15.79■□□□□ 0.12
GFRA3O60609 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.79■□□□□ 0.12
GFRA3O60609 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms