Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 AC104581.4-201ENST00000623126 3052 ntBASIC15.24■□□□□ 0.03
IDH3BO43837 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.24■□□□□ 0.03
IDH3BO43837 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.24■□□□□ 0.03
IDH3BO43837 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.24■□□□□ 0.03
IDH3BO43837 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.24■□□□□ 0.03
IDH3BO43837 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.24■□□□□ 0.03
IDH3BO43837 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.24■□□□□ 0.03
IDH3BO43837 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.24■□□□□ 0.03
IDH3BO43837 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.24■□□□□ 0.03
IDH3BO43837 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
IDH3BO43837 TERC-201ENST00000602385 541 ntBASIC15.24■□□□□ 0.03
IDH3BO43837 AC013467.2-201ENST00000605472 835 ntBASIC15.24■□□□□ 0.03
IDH3BO43837 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
IDH3BO43837 NPAP1P7-201ENST00000613027 823 ntBASIC15.24■□□□□ 0.03
IDH3BO43837 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 AC092171.3-201ENST00000610122 2651 ntBASIC15.24■□□□□ 0.03
IDH3BO43837 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IDH3BO43837 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.23■□□□□ 0.03
IDH3BO43837 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.23■□□□□ 0.03
IDH3BO43837 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
IDH3BO43837 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.23■□□□□ 0.03
IDH3BO43837 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 FAM210CP-201ENST00000445714 574 ntBASIC15.23■□□□□ 0.03
IDH3BO43837 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IDH3BO43837 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.23■□□□□ 0.03
IDH3BO43837 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 AC099336.1-202ENST00000602961 463 ntBASIC15.23■□□□□ 0.03
IDH3BO43837 AL591684.3-201ENST00000605187 298 ntBASIC15.23■□□□□ 0.03
IDH3BO43837 AC069148.1-201ENST00000608741 768 ntBASIC15.23■□□□□ 0.03
IDH3BO43837 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.23■□□□□ 0.03
IDH3BO43837 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 AP005117.1-201ENST00000584346 1413 ntBASIC15.23■□□□□ 0.03
IDH3BO43837 AP002414.2-201ENST00000591780 3365 ntBASIC15.23■□□□□ 0.03
IDH3BO43837 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.23■□□□□ 0.03
IDH3BO43837 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IDH3BO43837 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
IDH3BO43837 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 AL590787.1-201ENST00000568856 1315 ntBASIC15.22■□□□□ 0.03
IDH3BO43837 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms