Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ACTN4O43707 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 RHOQP3-201ENST00000437982 621 ntBASIC18.5■□□□□ 0.55
ACTN4O43707 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.5■□□□□ 0.55
ACTN4O43707 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.5■□□□□ 0.55
ACTN4O43707 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ACTN4O43707 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ACTN4O43707 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ACTN4O43707 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ACTN4O43707 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.5■□□□□ 0.55
ACTN4O43707 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.5■□□□□ 0.55
ACTN4O43707 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.49■□□□□ 0.55
ACTN4O43707 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 CDC14C-201ENST00000428251 1719 ntBASIC18.49■□□□□ 0.55
ACTN4O43707 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.49■□□□□ 0.55
ACTN4O43707 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ACTN4O43707 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 PMS2P4-201ENST00000412466 1052 ntBASIC18.49■□□□□ 0.55
ACTN4O43707 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
ACTN4O43707 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.49■□□□□ 0.55
ACTN4O43707 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.49■□□□□ 0.55
ACTN4O43707 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ACTN4O43707 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.49■□□□□ 0.55
ACTN4O43707 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.49■□□□□ 0.55
ACTN4O43707 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ACTN4O43707 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.49■□□□□ 0.55
ACTN4O43707 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 AC112504.1-201ENST00000623415 1841 ntBASIC18.49■□□□□ 0.55
ACTN4O43707 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACTN4O43707 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.48■□□□□ 0.55
ACTN4O43707 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.48■□□□□ 0.55
ACTN4O43707 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 CRYGEP-201ENST00000412192 528 ntBASIC18.48■□□□□ 0.55
ACTN4O43707 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.48■□□□□ 0.55
ACTN4O43707 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.48■□□□□ 0.55
ACTN4O43707 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.48■□□□□ 0.55
ACTN4O43707 AC096734.2-201ENST00000562054 433 ntBASIC18.48■□□□□ 0.55
ACTN4O43707 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.48■□□□□ 0.55
ACTN4O43707 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.48■□□□□ 0.55
ACTN4O43707 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ACTN4O43707 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.48■□□□□ 0.55
ACTN4O43707 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACTN4O43707 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.48■□□□□ 0.55
ACTN4O43707 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.48■□□□□ 0.55
ACTN4O43707 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.47■□□□□ 0.55
ACTN4O43707 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms