Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 PCDHA1-201ENST00000378133 2726 ntBASIC16.47■□□□□ 0.23
LDB2O43679 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 AC073439.1-201ENST00000624121 1774 ntBASIC16.47■□□□□ 0.23
LDB2O43679 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.47■□□□□ 0.23
LDB2O43679 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 AC004832.2-201ENST00000426397 482 ntBASIC16.47■□□□□ 0.23
LDB2O43679 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB2O43679 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 AC002347.1-201ENST00000569543 541 ntBASIC16.47■□□□□ 0.23
LDB2O43679 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.47■□□□□ 0.23
LDB2O43679 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.47■□□□□ 0.23
LDB2O43679 AC092902.6-201ENST00000641783 218 ntBASIC16.47■□□□□ 0.23
LDB2O43679 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LDB2O43679 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LDB2O43679 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB2O43679 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB2O43679 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.46■□□□□ 0.23
LDB2O43679 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.46■□□□□ 0.23
LDB2O43679 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
LDB2O43679 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.46■□□□□ 0.23
LDB2O43679 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.46■□□□□ 0.23
LDB2O43679 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.46■□□□□ 0.23
LDB2O43679 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.46■□□□□ 0.23
LDB2O43679 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.46■□□□□ 0.23
LDB2O43679 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LDB2O43679 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
LDB2O43679 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB2O43679 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LDB2O43679 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.45■□□□□ 0.22
LDB2O43679 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.45■□□□□ 0.22
LDB2O43679 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.45■□□□□ 0.22
LDB2O43679 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.45■□□□□ 0.22
LDB2O43679 RARRES2P8-201ENST00000566335 367 ntBASIC16.45■□□□□ 0.22
LDB2O43679 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.45■□□□□ 0.22
LDB2O43679 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LDB2O43679 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 U82695.1-201ENST00000635752 1889 ntBASIC16.45■□□□□ 0.22
LDB2O43679 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms