Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 BX842568.4-201ENST00000421222 227 ntBASIC15.69■□□□□ 0.1
PROM1O43490 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.69■□□□□ 0.1
PROM1O43490 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.69■□□□□ 0.1
PROM1O43490 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PROM1O43490 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.69■□□□□ 0.1
PROM1O43490 AC020765.3-201ENST00000613051 740 ntBASIC15.69■□□□□ 0.1
PROM1O43490 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.69■□□□□ 0.1
PROM1O43490 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PROM1O43490 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.69■□□□□ 0.1
PROM1O43490 AC005052.1-201ENST00000625181 2492 ntBASIC15.69■□□□□ 0.1
PROM1O43490 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.68■□□□□ 0.1
PROM1O43490 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.68■□□□□ 0.1
PROM1O43490 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PROM1O43490 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 PCGF3-213ENST00000620529 1899 ntBASIC15.68■□□□□ 0.1
PROM1O43490 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PROM1O43490 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PROM1O43490 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
PROM1O43490 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.68■□□□□ 0.1
PROM1O43490 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.68■□□□□ 0.1
PROM1O43490 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.68■□□□□ 0.1
PROM1O43490 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.68■□□□□ 0.1
PROM1O43490 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.68■□□□□ 0.1
PROM1O43490 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PROM1O43490 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 LINC01144-201ENST00000626198 1710 ntBASIC15.68■□□□□ 0.1
PROM1O43490 AC092919.2-201ENST00000623631 1645 ntBASIC15.68■□□□□ 0.1
PROM1O43490 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.68■□□□□ 0.1
PROM1O43490 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PROM1O43490 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PROM1O43490 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PROM1O43490 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.67■□□□□ 0.1
PROM1O43490 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 AC023274.1-201ENST00000418278 595 ntBASIC15.67■□□□□ 0.1
PROM1O43490 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.67■□□□□ 0.1
PROM1O43490 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.67■□□□□ 0.1
PROM1O43490 PGAM5P1-201ENST00000518923 814 ntBASIC15.67■□□□□ 0.1
PROM1O43490 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PROM1O43490 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.67■□□□□ 0.1
PROM1O43490 AC040169.1-201ENST00000565382 521 ntBASIC15.67■□□□□ 0.1
PROM1O43490 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PROM1O43490 AP002472.1-201ENST00000577490 586 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms