Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 AC136621.1-201ENST00000624017 2304 ntBASIC16.78■□□□□ 0.28
RIPK2O43353 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RIPK2O43353 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RIPK2O43353 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.78■□□□□ 0.28
RIPK2O43353 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.78■□□□□ 0.28
RIPK2O43353 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RIPK2O43353 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RIPK2O43353 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.78■□□□□ 0.28
RIPK2O43353 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RIPK2O43353 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPK2O43353 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RIPK2O43353 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RIPK2O43353 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPK2O43353 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.78■□□□□ 0.28
RIPK2O43353 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RIPK2O43353 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPK2O43353 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RIPK2O43353 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
RIPK2O43353 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.77■□□□□ 0.28
RIPK2O43353 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 AP002414.2-201ENST00000591780 3365 ntBASIC16.77■□□□□ 0.28
RIPK2O43353 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.77■□□□□ 0.28
RIPK2O43353 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RIPK2O43353 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.77■□□□□ 0.28
RIPK2O43353 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 AC211429.1-201ENST00000415277 523 ntBASIC16.77■□□□□ 0.28
RIPK2O43353 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.77■□□□□ 0.28
RIPK2O43353 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 AC020765.3-201ENST00000613051 740 ntBASIC16.77■□□□□ 0.28
RIPK2O43353 AL022326.1-202ENST00000641533 845 ntBASIC16.77■□□□□ 0.28
RIPK2O43353 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RIPK2O43353 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPK2O43353 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RIPK2O43353 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIPK2O43353 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RIPK2O43353 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RIPK2O43353 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIPK2O43353 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.77■□□□□ 0.27
RIPK2O43353 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RIPK2O43353 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
RIPK2O43353 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIPK2O43353 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIPK2O43353 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.77■□□□□ 0.27
RIPK2O43353 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.76■□□□□ 0.27
RIPK2O43353 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.76■□□□□ 0.27
RIPK2O43353 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.76■□□□□ 0.27
RIPK2O43353 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.76■□□□□ 0.27
RIPK2O43353 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.76■□□□□ 0.27
RIPK2O43353 AP001269.4-201ENST00000609611 512 ntBASIC16.76■□□□□ 0.27
RIPK2O43353 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.76■□□□□ 0.27
RIPK2O43353 AC066615.1-201ENST00000640911 628 ntBASIC16.76■□□□□ 0.27
RIPK2O43353 AF228730.7-201ENST00000641842 219 ntBASIC16.76■□□□□ 0.27
RIPK2O43353 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.76■□□□□ 0.27
RIPK2O43353 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms