Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
ATP2A1O14983 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP2A1O14983 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.8■□□□□ 0.6
ATP2A1O14983 AC005034.1-201ENST00000426657 489 ntBASIC18.8■□□□□ 0.6
ATP2A1O14983 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.8■□□□□ 0.6
ATP2A1O14983 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP2A1O14983 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.8■□□□□ 0.6
ATP2A1O14983 AP005018.1-201ENST00000525475 301 ntBASIC18.8■□□□□ 0.6
ATP2A1O14983 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP2A1O14983 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
ATP2A1O14983 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP2A1O14983 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A1O14983 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A1O14983 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP2A1O14983 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP2A1O14983 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
ATP2A1O14983 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A1O14983 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A1O14983 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATP2A1O14983 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A1O14983 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A1O14983 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP2A1O14983 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP2A1O14983 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATP2A1O14983 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATP2A1O14983 SPDYE17-201ENST00000412399 783 ntBASIC18.79■□□□□ 0.6
ATP2A1O14983 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2A1O14983 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ATP2A1O14983 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2A1O14983 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.79■□□□□ 0.6
ATP2A1O14983 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2A1O14983 AC027307.3-201ENST00000594262 1100 ntBASIC18.79■□□□□ 0.6
ATP2A1O14983 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.79■□□□□ 0.6
ATP2A1O14983 AL358472.5-202ENST00000641448 1267 ntBASIC18.79■□□□□ 0.6
ATP2A1O14983 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP2A1O14983 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP2A1O14983 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATP2A1O14983 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2A1O14983 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A1O14983 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP2A1O14983 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ATP2A1O14983 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP2A1O14983 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP2A1O14983 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 AC025048.6-201ENST00000634326 1161 ntBASIC18.78■□□□□ 0.6
ATP2A1O14983 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP2A1O14983 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A1O14983 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A1O14983 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP2A1O14983 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
ATP2A1O14983 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms