Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV5-4A0A0C4DH59 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 MIR648-201ENST00000385046 94 ntBASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL627223.1-201ENST00000416693 442 ntBASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC254562.1-201ENST00000417586 456 ntBASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC061975.2-201ENST00000581722 295 ntBASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC079328.2-201ENST00000561241 3354 ntBASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 SLC25A39P2-201ENST00000537614 270 ntBASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-4A0A0C4DH59 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms