Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AC126755.1-201ENST00000525846 6405 ntBASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 BX005266.1-201ENST00000473402 457 ntBASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AC010331.1-201ENST00000611423 582 ntBASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AC073592.4-201ENST00000623827 446 ntBASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AL121956.5-201ENST00000625261 221 ntBASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 AC067930.6-201ENST00000623257 4947 ntBASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 RCN1P1-201ENST00000400413 996 ntBASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 FAM86EP-206ENST00000510506 987 ntBASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 MPDU1-223ENST00000582151 728 ntBASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 AL590326.2-201ENST00000625139 305 ntBASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms