Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC026120.1-201ENST00000611536 926 ntBASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 AL035252.4-201ENST00000624174 288 ntBASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 AC005052.1-201ENST00000625181 2492 ntBASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 LINC01144-201ENST00000626198 1710 ntBASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 GK-202ENST00000378941 458 ntTSL 3 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 TSEN15P1-201ENST00000423257 515 ntBASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 AC005034.1-201ENST00000426657 489 ntBASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 AC063926.2-201ENST00000623766 1308 ntBASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI2Q9Y5P3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 SPDYE11-202ENST00000450699 704 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 RN7SL589P-201ENST00000481268 310 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 KRT8P48-201ENST00000515599 1220 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 AC190387.1-201ENST00000551683 408 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 SPDYE9P-201ENST00000570642 692 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 SPDYE10P-202ENST00000612005 668 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 SPDYE8P-202ENST00000612377 668 ntBASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms