Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 AC097637.2-201ENST00000624096 1997 ntBASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 KRT18P38-201ENST00000449496 1282 ntBASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 AC124864.1-201ENST00000623408 392 ntBASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB1Q9Y5G3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB1Q9Y5G3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms