Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 MIR661-201ENST00000384842 89 ntBASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 SLC25A39P2-201ENST00000537614 270 ntBASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AC026150.2-201ENST00000564693 1156 ntBASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AC005412.3-201ENST00000580309 715 ntBASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AC027307.3-201ENST00000594262 1100 ntBASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 AL391256.1-201ENST00000443260 1855 ntBASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN3Q9UPQ7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.25■□□□□ 0.99
PDZRN3Q9UPQ7 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 AL512638.1-201ENST00000457493 794 ntBASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 AC109635.5-201ENST00000533593 962 ntBASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
PDZRN3Q9UPQ7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 TREML5P-201ENST00000421694 576 ntBASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 SPDYE14P-201ENST00000442619 822 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms