Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 AC027307.3-201ENST00000594262 1100 ntBASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 AL691432.1-201ENST00000596308 1422 ntBASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPO2Q9UMS6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AL136982.4-201ENST00000437689 1740 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 HIST3H2BA-201ENST00000436555 524 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AC135586.1-201ENST00000539323 574 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AC243562.2-201ENST00000561247 970 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AC004233.3-201ENST00000607794 1269 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AL358472.5-202ENST00000641448 1267 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AC026471.1-201ENST00000564629 3026 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 AL391825.1-201ENST00000457671 1364 ntBASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPO2Q9UMS6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms