Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 AC098614.1-201ENST00000368528 745 ntBASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 SPDYE17-201ENST00000412399 783 ntBASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 RN7SL752P-201ENST00000463779 287 ntBASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 HILS1-202ENST00000545329 423 ntBASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 SRD5A3P1-201ENST00000603021 949 ntBASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 AC026979.3-201ENST00000607315 403 ntBASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1R1Q9NWW0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AC087499.6-201ENST00000411576 835 ntBASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AP006294.1-201ENST00000415407 339 ntBASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AC093004.1-201ENST00000508850 424 ntBASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 SLC7A15P-201ENST00000424028 1363 ntBASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 AL391825.1-201ENST00000457671 1364 ntBASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1R1Q9NWW0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 AC005915.1-201ENST00000624912 2018 ntBASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1R1Q9NWW0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC006538.1-201ENST00000567905 1585 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms