Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 AL080243.2-201ENST00000418783 582 ntBASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 PRYP6-201ENST00000514804 343 ntBASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 ZNF890P-202ENST00000530367 1156 ntBASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 AD000864.1-201ENST00000624076 2295 ntBASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 SPDYE19P-201ENST00000338590 713 ntBASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AC084346.2-201ENST00000607097 949 ntBASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 AC007431.3-201ENST00000623221 587 ntBASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 GGT3P-204ENST00000453783 1664 ntBASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
PDLIM7Q9NR12 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 AC073439.1-201ENST00000624121 1774 ntBASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 FAM220BP-201ENST00000377689 816 ntBASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 AC093004.1-201ENST00000508850 424 ntBASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 AL033527.4-201ENST00000641026 673 ntBASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDLIM7Q9NR12 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms