Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 AC243562.1-201ENST00000560672 389 ntBASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 PCDH8P1-201ENST00000428983 2773 ntBASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 KRT18P32-201ENST00000424695 1287 ntBASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 AC004449.1-201ENST00000564240 433 ntBASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP3Q9BWW4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms