Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RPSAP52-203ENST00000622976 1023 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDCA3Q99618 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.98■□□□□ 0.31
CDCA3Q99618 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 AC092068.3-201ENST00000587894 2016 ntBASIC16.97■□□□□ 0.31
CDCA3Q99618 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDCA3Q99618 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.97■□□□□ 0.31
CDCA3Q99618 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 PDIA3P1-201ENST00000471856 1510 ntBASIC16.97■□□□□ 0.31
CDCA3Q99618 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDCA3Q99618 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.97■□□□□ 0.31
CDCA3Q99618 AL355994.2-201ENST00000447882 704 ntBASIC16.97■□□□□ 0.31
CDCA3Q99618 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 RNA5SP412-201ENST00000516234 123 ntBASIC16.97■□□□□ 0.31
CDCA3Q99618 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.97■□□□□ 0.31
CDCA3Q99618 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.97■□□□□ 0.31
CDCA3Q99618 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CDCA3Q99618 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 KRT8P44-201ENST00000441609 1350 ntBASIC16.97■□□□□ 0.31
CDCA3Q99618 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDCA3Q99618 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CDCA3Q99618 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.97■□□□□ 0.31
CDCA3Q99618 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.97■□□□□ 0.31
CDCA3Q99618 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CDCA3Q99618 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDCA3Q99618 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDCA3Q99618 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDCA3Q99618 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.96■□□□□ 0.31
CDCA3Q99618 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.96■□□□□ 0.31
CDCA3Q99618 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.96■□□□□ 0.31
CDCA3Q99618 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CDCA3Q99618 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 MIR1908-201ENST00000410394 80 ntBASIC16.96■□□□□ 0.31
CDCA3Q99618 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 FO681548.1-201ENST00000455617 1132 ntBASIC16.96■□□□□ 0.31
CDCA3Q99618 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.96■□□□□ 0.31
CDCA3Q99618 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CDCA3Q99618 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.96■□□□□ 0.31
CDCA3Q99618 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.96■□□□□ 0.31
CDCA3Q99618 MIR5189-201ENST00000577370 114 ntBASIC16.96■□□□□ 0.31
CDCA3Q99618 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.96■□□□□ 0.31
CDCA3Q99618 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.96■□□□□ 0.31
CDCA3Q99618 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.96■□□□□ 0.31
CDCA3Q99618 CU634019.7-201ENST00000624153 1185 ntBASIC16.96■□□□□ 0.31
CDCA3Q99618 FP236241.2-201ENST00000624906 1185 ntBASIC16.96■□□□□ 0.31
CDCA3Q99618 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.96■□□□□ 0.31
CDCA3Q99618 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDCA3Q99618 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDCA3Q99618 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDCA3Q99618 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.96■□□□□ 0.3
CDCA3Q99618 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDCA3Q99618 AC134043.2-201ENST00000624206 2238 ntBASIC16.96■□□□□ 0.3
CDCA3Q99618 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDCA3Q99618 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.96■□□□□ 0.3
CDCA3Q99618 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDCA3Q99618 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDCA3Q99618 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.96■□□□□ 0.3
CDCA3Q99618 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 U82695.1-201ENST00000635752 1889 ntBASIC16.95■□□□□ 0.3
CDCA3Q99618 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.95■□□□□ 0.3
CDCA3Q99618 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDCA3Q99618 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms