Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 IGHJ2P-201ENST00000454480 60 ntBASIC16.7■□□□□ 0.26
PHOX2BQ99453 CTBP2P5-201ENST00000454986 1264 ntBASIC16.7■□□□□ 0.26
PHOX2BQ99453 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 CETN4P-206ENST00000642099 2168 ntBASIC16.7■□□□□ 0.26
PHOX2BQ99453 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 LINC00896-202ENST00000609602 2128 ntBASIC16.69■□□□□ 0.26
PHOX2BQ99453 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AC098850.1-201ENST00000419919 790 ntBASIC16.69■□□□□ 0.26
PHOX2BQ99453 AC142381.1-201ENST00000426099 345 ntBASIC16.69■□□□□ 0.26
PHOX2BQ99453 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AC007551.1-201ENST00000457394 519 ntBASIC16.69■□□□□ 0.26
PHOX2BQ99453 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.69■□□□□ 0.26
PHOX2BQ99453 PKD1P1-201ENST00000458669 6805 ntBASIC16.69■□□□□ 0.26
PHOX2BQ99453 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHOX2BQ99453 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms