Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 KRT8P37-201ENST00000451609 1420 ntBASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.14■□□□□ 0.66
CDK5RAP2Q96SN8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 AC005034.1-201ENST00000426657 489 ntBASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 GAPDHP21-201ENST00000450301 1010 ntBASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP2Q96SN8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 TARDBPP1-201ENST00000442013 1203 ntBASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP2Q96SN8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 CU639417.3-201ENST00000624240 1404 ntBASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 TMEM14DP-201ENST00000422205 345 ntBASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 HNRNPUP1-201ENST00000554987 333 ntBASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 AC026471.1-201ENST00000564629 3026 ntBASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CDK5RAP2Q96SN8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 AC079776.1-201ENST00000401540 1152 ntBASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms