Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 IGHV3-62-201ENST00000520057 340 ntBASIC15.96■□□□□ 0.15
RNF31Q96EP0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 SPCS2P1-201ENST00000561636 679 ntBASIC15.96■□□□□ 0.15
RNF31Q96EP0 AL138918.1-201ENST00000568306 659 ntBASIC15.96■□□□□ 0.15
RNF31Q96EP0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF31Q96EP0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF31Q96EP0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.96■□□□□ 0.14
RNF31Q96EP0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF31Q96EP0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF31Q96EP0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF31Q96EP0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.96■□□□□ 0.14
RNF31Q96EP0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF31Q96EP0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF31Q96EP0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 AL671710.1-201ENST00000610245 2349 ntBASIC15.95■□□□□ 0.14
RNF31Q96EP0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 GPS2P2-201ENST00000430745 888 ntBASIC15.95■□□□□ 0.14
RNF31Q96EP0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 SLC25A39P2-201ENST00000537614 270 ntBASIC15.95■□□□□ 0.14
RNF31Q96EP0 AC005412.3-201ENST00000580309 715 ntBASIC15.95■□□□□ 0.14
RNF31Q96EP0 MIR3197-201ENST00000582241 73 ntBASIC15.95■□□□□ 0.14
RNF31Q96EP0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 AL031055.1-201ENST00000606362 631 ntBASIC15.95■□□□□ 0.14
RNF31Q96EP0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF31Q96EP0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF31Q96EP0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 FLJ38576-201ENST00000623820 2459 ntBASIC15.94■□□□□ 0.14
RNF31Q96EP0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RNF31Q96EP0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF31Q96EP0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF31Q96EP0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms