Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.8■□□□□ 0.28
RTP4Q96DX8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AP005117.1-202ENST00000581724 1908 ntBASIC16.79■□□□□ 0.28
RTP4Q96DX8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AC092474.2-201ENST00000424288 719 ntBASIC16.79■□□□□ 0.28
RTP4Q96DX8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 AC008677.1-201ENST00000519230 1561 ntBASIC16.79■□□□□ 0.28
RTP4Q96DX8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTP4Q96DX8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.79■□□□□ 0.28
RTP4Q96DX8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms