Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AL136982.4-201ENST00000437689 1740 ntBASIC16.28■□□□□ 0.2
CLDN23Q96B33 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.27■□□□□ 0.2
CLDN23Q96B33 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN23Q96B33 AC020763.4-201ENST00000623414 4170 ntBASIC16.27■□□□□ 0.2
CLDN23Q96B33 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN23Q96B33 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN23Q96B33 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 AC108725.1-201ENST00000495472 409 ntBASIC16.27■□□□□ 0.2
CLDN23Q96B33 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 TDH-203ENST00000531764 1110 ntBASIC16.27■□□□□ 0.2
CLDN23Q96B33 AP000812.2-201ENST00000538934 718 ntBASIC16.27■□□□□ 0.2
CLDN23Q96B33 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 AL158212.4-201ENST00000624062 1286 ntBASIC16.27■□□□□ 0.2
CLDN23Q96B33 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN23Q96B33 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN23Q96B33 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN23Q96B33 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLDN23Q96B33 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN23Q96B33 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLDN23Q96B33 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CLDN23Q96B33 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.27■□□□□ 0.19
CLDN23Q96B33 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN23Q96B33 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
CLDN23Q96B33 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 ENPP7P5-201ENST00000541031 1031 ntBASIC16.26■□□□□ 0.19
CLDN23Q96B33 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 BRI3BPP1-201ENST00000594224 787 ntBASIC16.26■□□□□ 0.19
CLDN23Q96B33 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN23Q96B33 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN23Q96B33 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 AL031731.1-201ENST00000642131 2094 ntBASIC16.25■□□□□ 0.19
CLDN23Q96B33 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms