Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF34Q969K3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF34Q969K3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF34Q969K3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF34Q969K3 MIR4469-201ENST00000583919 79 ntBASIC17.29■□□□□ 0.36
RNF34Q969K3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF34Q969K3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RNF34Q969K3 AC092902.6-201ENST00000641783 218 ntBASIC17.29■□□□□ 0.36
RNF34Q969K3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF34Q969K3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RNF34Q969K3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RNF34Q969K3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF34Q969K3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF34Q969K3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF34Q969K3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF34Q969K3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF34Q969K3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF34Q969K3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 AL031731.1-201ENST00000642131 2094 ntBASIC17.28■□□□□ 0.36
RNF34Q969K3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF34Q969K3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF34Q969K3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF34Q969K3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 ELL2P1-201ENST00000413990 1906 ntBASIC17.27■□□□□ 0.36
RNF34Q969K3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF34Q969K3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF34Q969K3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF34Q969K3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms