Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC4Q92889 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC4Q92889 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC4Q92889 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ERCC4Q92889 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.78■□□□□ 0.6
ERCC4Q92889 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.78■□□□□ 0.6
ERCC4Q92889 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.78■□□□□ 0.6
ERCC4Q92889 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
ERCC4Q92889 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 AC012313.10-201ENST00000623509 926 ntBASIC18.78■□□□□ 0.6
ERCC4Q92889 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC4Q92889 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC4Q92889 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 AP003680.1-201ENST00000598970 3660 ntBASIC18.78■□□□□ 0.6
ERCC4Q92889 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC4Q92889 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ERCC4Q92889 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ERCC4Q92889 TSPY19P-201ENST00000418461 509 ntBASIC18.77■□□□□ 0.6
ERCC4Q92889 TSPY18P-201ENST00000441642 509 ntBASIC18.77■□□□□ 0.6
ERCC4Q92889 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.77■□□□□ 0.6
ERCC4Q92889 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.77■□□□□ 0.6
ERCC4Q92889 AC139887.3-201ENST00000568585 713 ntBASIC18.77■□□□□ 0.6
ERCC4Q92889 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.77■□□□□ 0.6
ERCC4Q92889 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC4Q92889 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC4Q92889 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ERCC4Q92889 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC4Q92889 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC4Q92889 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC4Q92889 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.77■□□□□ 0.59
ERCC4Q92889 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC4Q92889 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
ERCC4Q92889 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC4Q92889 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC4Q92889 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.77■□□□□ 0.59
ERCC4Q92889 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ERCC4Q92889 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.77■□□□□ 0.59
ERCC4Q92889 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC4Q92889 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC4Q92889 TSPY26P-202ENST00000565928 3884 ntBASIC18.76■□□□□ 0.59
ERCC4Q92889 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC4Q92889 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC4Q92889 MST1L-201ENST00000442552 2185 ntBASIC18.76■□□□□ 0.59
ERCC4Q92889 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC4Q92889 KRT8P39-201ENST00000396270 1433 ntBASIC18.76■□□□□ 0.59
ERCC4Q92889 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC4Q92889 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ERCC4Q92889 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC4Q92889 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC4Q92889 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ERCC4Q92889 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC4Q92889 AF238378.1-201ENST00000526806 358 ntBASIC18.76■□□□□ 0.59
ERCC4Q92889 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.76■□□□□ 0.59
ERCC4Q92889 AC021087.4-201ENST00000563761 564 ntBASIC18.76■□□□□ 0.59
ERCC4Q92889 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC4Q92889 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC4Q92889 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC4Q92889 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC4Q92889 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC4Q92889 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC4Q92889 AC131009.4-201ENST00000624048 1740 ntBASIC18.76■□□□□ 0.59
ERCC4Q92889 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms