Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 Z97205.2-201ENST00000564697 1639 ntBASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRUNE2Q8WUY3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 HIST3H2BA-201ENST00000436555 524 ntBASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 AC006480.2-201ENST00000609770 1337 ntBASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 AC106760.1-201ENST00000508690 800 ntBASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 AC091812.3-201ENST00000621362 345 ntBASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRUNE2Q8WUY3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AL355864.2-201ENST00000447420 863 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AC079336.7-201ENST00000623428 1078 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AC245884.6-201ENST00000515672 1067 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AL451050.2-201ENST00000606967 682 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 FGFR3P5-201ENST00000564496 886 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 LINC01115-203ENST00000606068 577 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 AC005252.2-201ENST00000624630 1141 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms