Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEFF1Q8IYR6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEFF1Q8IYR6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEFF1Q8IYR6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEFF1Q8IYR6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 AL512361.1-201ENST00000554200 418 ntBASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 WASH4P-201ENST00000564273 1246 ntBASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 TUBB7P-202ENST00000428444 1305 ntBASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 TUBB8P7-204ENST00000567960 1332 ntBASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEFF1Q8IYR6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 AC011495.1-201ENST00000498085 584 ntBASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 SPDYE18-201ENST00000510091 1050 ntBASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 LINC02012-201ENST00000608206 1725 ntBASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 AC007431.3-201ENST00000623221 587 ntBASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEFF1Q8IYR6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 AC092053.1-201ENST00000605787 1936 ntBASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 AC093004.1-201ENST00000508850 424 ntBASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 ZNF890P-202ENST00000530367 1156 ntBASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 MIR6799-201ENST00000620297 69 ntBASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEFF1Q8IYR6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms