Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 AL391005.1-201ENST00000623953 2435 ntBASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF440Q8IYI8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 U82695.1-201ENST00000635752 1889 ntBASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 PKD1P5-201ENST00000532415 10291 ntBASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 AC092364.2-201ENST00000596710 2692 ntBASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 IL9RP2-201ENST00000423948 1312 ntBASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 BCAR1-209ENST00000546196 1340 ntBASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF440Q8IYI8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AL662844.4-201ENST00000606367 2838 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AL590627.1-203ENST00000421194 1026 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AL591424.1-201ENST00000442569 1213 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 FDX1P1-201ENST00000449115 551 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 BX640515.1-201ENST00000617215 977 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AC004877.2-201ENST00000623941 599 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AL596087.1-201ENST00000400979 1969 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AC005622.1-201ENST00000636801 1703 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 AC025580.3-201ENST00000617932 1424 ntBASIC15.09■□□□□ 0.01
ZNF440Q8IYI8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF440Q8IYI8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.08■□□□□ 0.01
ZNF440Q8IYI8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms