Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 POM121L3P-201ENST00000419331 1163 ntBASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 DRAXINP1-201ENST00000437611 948 ntBASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 MIR4492-201ENST00000581627 80 ntBASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 MPDU1-223ENST00000582151 728 ntBASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 AC066615.1-201ENST00000640911 628 ntBASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 PCGF3-213ENST00000620529 1899 ntBASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUDCD3Q8IVD9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 CDC14C-201ENST00000428251 1719 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 LINC01144-201ENST00000626198 1710 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 AC211429.1-201ENST00000415277 523 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 IGHV3-47-201ENST00000425060 335 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 TSSC2-201ENST00000450217 709 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 TOB2P1-201ENST00000469761 992 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 TPSP2-201ENST00000561760 610 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 LINC02447-202ENST00000501888 2146 ntBASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
NUDCD3Q8IVD9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
NUDCD3Q8IVD9 AC073347.1-201ENST00000421633 2643 ntBASIC16.46■□□□□ 0.22
NUDCD3Q8IVD9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
NUDCD3Q8IVD9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 AC092850.2-201ENST00000623821 2697 ntBASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 AC112504.1-201ENST00000623415 1841 ntBASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms