Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.03□□□□□ -0.64
SCXQ7RTU7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 MTDHP5-201ENST00000598980 586 ntBASIC11.03□□□□□ -0.64
SCXQ7RTU7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 AC097637.2-201ENST00000624096 1997 ntBASIC11.03□□□□□ -0.64
SCXQ7RTU7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
SCXQ7RTU7 AC009336.1-201ENST00000608941 1553 ntBASIC11.03□□□□□ -0.64
SCXQ7RTU7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCXQ7RTU7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.02□□□□□ -0.64
SCXQ7RTU7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
SCXQ7RTU7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.02□□□□□ -0.64
SCXQ7RTU7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
SCXQ7RTU7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
SCXQ7RTU7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCXQ7RTU7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 AC097376.2-205ENST00000610159 5334 ntBASIC11.02□□□□□ -0.65
SCXQ7RTU7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.02□□□□□ -0.65
SCXQ7RTU7 KRT18P2-201ENST00000447938 1258 ntBASIC11.02□□□□□ -0.65
SCXQ7RTU7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 IGHV3-65-201ENST00000523210 341 ntBASIC11.02□□□□□ -0.65
SCXQ7RTU7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 AC008667.4-201ENST00000607370 168 ntBASIC11.02□□□□□ -0.65
SCXQ7RTU7 AC134684.3-201ENST00000641758 218 ntBASIC11.02□□□□□ -0.65
SCXQ7RTU7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.02□□□□□ -0.65
SCXQ7RTU7 AC002310.6-201ENST00000624451 1377 ntBASIC11.02□□□□□ -0.65
SCXQ7RTU7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SCXQ7RTU7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms