Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATL3Q6DD88 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
ATL3Q6DD88 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATL3Q6DD88 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATL3Q6DD88 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.83■□□□□ 0.61
ATL3Q6DD88 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
ATL3Q6DD88 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ATL3Q6DD88 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ATL3Q6DD88 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.83■□□□□ 0.61
ATL3Q6DD88 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ATL3Q6DD88 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL3Q6DD88 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.83■□□□□ 0.6
ATL3Q6DD88 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.83■□□□□ 0.6
ATL3Q6DD88 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.83■□□□□ 0.6
ATL3Q6DD88 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.83■□□□□ 0.6
ATL3Q6DD88 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.83■□□□□ 0.6
ATL3Q6DD88 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL3Q6DD88 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.83■□□□□ 0.6
ATL3Q6DD88 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 AC132872.4-202ENST00000622924 2756 ntBASIC18.82■□□□□ 0.6
ATL3Q6DD88 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 AC104640.1-201ENST00000562617 2109 ntBASIC18.82■□□□□ 0.6
ATL3Q6DD88 AC008677.1-201ENST00000519230 1561 ntBASIC18.82■□□□□ 0.6
ATL3Q6DD88 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.82■□□□□ 0.6
ATL3Q6DD88 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 UNC93B7-201ENST00000509439 705 ntBASIC18.82■□□□□ 0.6
ATL3Q6DD88 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 AC022532.1-201ENST00000624563 1728 ntBASIC18.82■□□□□ 0.6
ATL3Q6DD88 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL3Q6DD88 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL3Q6DD88 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL3Q6DD88 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL3Q6DD88 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms