Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 C20orf181-201ENST00000623918 480 ntBASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 AL596087.1-201ENST00000400979 1969 ntBASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN20Q4JDL3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 AL135744.1-201ENST00000565098 629 ntBASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 MTDHP5-201ENST00000598980 586 ntBASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN20Q4JDL3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN20Q4JDL3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 AL138918.1-201ENST00000568306 659 ntBASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms