Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM4P67936 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.59■□□□□ 0.57
TPM4P67936 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM4P67936 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM4P67936 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM4P67936 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TPM4P67936 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TPM4P67936 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM4P67936 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TPM4P67936 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.59■□□□□ 0.57
TPM4P67936 KRT18P1-202ENST00000452408 1331 ntBASIC18.59■□□□□ 0.57
TPM4P67936 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TPM4P67936 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TPM4P67936 RCN1P2-201ENST00000398357 915 ntBASIC18.59■□□□□ 0.57
TPM4P67936 AC104076.2-201ENST00000448912 469 ntBASIC18.59■□□□□ 0.57
TPM4P67936 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM4P67936 POU5F1P6-201ENST00000466990 990 ntBASIC18.59■□□□□ 0.57
TPM4P67936 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.59■□□□□ 0.57
TPM4P67936 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.59■□□□□ 0.57
TPM4P67936 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.59■□□□□ 0.57
TPM4P67936 AC010331.1-201ENST00000611423 582 ntBASIC18.59■□□□□ 0.57
TPM4P67936 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM4P67936 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM4P67936 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM4P67936 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM4P67936 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM4P67936 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM4P67936 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM4P67936 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM4P67936 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TPM4P67936 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM4P67936 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TPM4P67936 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM4P67936 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TPM4P67936 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM4P67936 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TPM4P67936 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.58■□□□□ 0.56
TPM4P67936 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.58■□□□□ 0.56
TPM4P67936 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM4P67936 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TPM4P67936 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM4P67936 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TPM4P67936 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.58■□□□□ 0.56
TPM4P67936 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM4P67936 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 AC092384.3-202ENST00000564646 2873 ntBASIC18.57■□□□□ 0.56
TPM4P67936 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 AL590787.1-201ENST00000568856 1315 ntBASIC18.57■□□□□ 0.56
TPM4P67936 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TPM4P67936 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.57■□□□□ 0.56
TPM4P67936 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.57■□□□□ 0.56
TPM4P67936 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 AC114341.1-201ENST00000618070 349 ntBASIC18.57■□□□□ 0.56
TPM4P67936 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM4P67936 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms