Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.34□□□□□ -0.11
UBA52P62987 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UBA52P62987 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.34□□□□□ -0.11
UBA52P62987 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UBA52P62987 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.34□□□□□ -0.11
UBA52P62987 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.34□□□□□ -0.11
UBA52P62987 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.34□□□□□ -0.11
UBA52P62987 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.34□□□□□ -0.11
UBA52P62987 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBA52P62987 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 AC022898.2-201ENST00000616822 1312 ntBASIC14.34□□□□□ -0.11
UBA52P62987 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBA52P62987 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
UBA52P62987 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
UBA52P62987 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBA52P62987 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBA52P62987 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
UBA52P62987 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
UBA52P62987 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBA52P62987 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.33□□□□□ -0.11
UBA52P62987 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBA52P62987 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBA52P62987 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
UBA52P62987 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBA52P62987 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBA52P62987 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
UBA52P62987 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.33□□□□□ -0.12
UBA52P62987 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.33□□□□□ -0.12
UBA52P62987 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.33□□□□□ -0.12
UBA52P62987 KRT18P65-201ENST00000439811 1286 ntBASIC14.33□□□□□ -0.12
UBA52P62987 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.33□□□□□ -0.12
UBA52P62987 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.33□□□□□ -0.12
UBA52P62987 AC034105.1-201ENST00000563488 319 ntBASIC14.33□□□□□ -0.12
UBA52P62987 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
UBA52P62987 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.33□□□□□ -0.12
UBA52P62987 AC025062.2-201ENST00000605477 670 ntBASIC14.33□□□□□ -0.12
UBA52P62987 Z83851.2-201ENST00000609564 659 ntBASIC14.33□□□□□ -0.12
UBA52P62987 AC116407.2-201ENST00000613639 860 ntBASIC14.33□□□□□ -0.12
UBA52P62987 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.33□□□□□ -0.12
UBA52P62987 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
UBA52P62987 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBA52P62987 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBA52P62987 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.33□□□□□ -0.12
UBA52P62987 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.33□□□□□ -0.12
UBA52P62987 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
UBA52P62987 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBA52P62987 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.32□□□□□ -0.12
UBA52P62987 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.32□□□□□ -0.12
UBA52P62987 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.32□□□□□ -0.12
UBA52P62987 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.32□□□□□ -0.12
UBA52P62987 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.32□□□□□ -0.12
UBA52P62987 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms