Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 AL035633.1-201ENST00000406139 838 ntBASIC18.9■□□□□ 0.62
CHMP4BP1P59074 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 AC243562.1-201ENST00000560672 389 ntBASIC18.9■□□□□ 0.62
CHMP4BP1P59074 RARRES2P8-201ENST00000566335 367 ntBASIC18.9■□□□□ 0.62
CHMP4BP1P59074 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP4BP1P59074 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP4BP1P59074 LINC02199-201ENST00000506655 2702 ntBASIC18.89■□□□□ 0.62
CHMP4BP1P59074 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 RBPMS2P1-201ENST00000437762 623 ntBASIC18.89■□□□□ 0.61
CHMP4BP1P59074 RN7SL589P-201ENST00000481268 310 ntBASIC18.89■□□□□ 0.61
CHMP4BP1P59074 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 AC069262.1-201ENST00000539058 672 ntBASIC18.89■□□□□ 0.61
CHMP4BP1P59074 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP4BP1P59074 FLJ16779-201ENST00000612722 7638 ntBASIC18.89■□□□□ 0.61
CHMP4BP1P59074 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 AC069335.1-201ENST00000489972 472 ntBASIC18.88■□□□□ 0.61
CHMP4BP1P59074 MIR4745-201ENST00000577608 62 ntBASIC18.88■□□□□ 0.61
CHMP4BP1P59074 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 AL603756.1-201ENST00000606511 2163 ntBASIC18.88■□□□□ 0.61
CHMP4BP1P59074 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP4BP1P59074 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PCDHA1-201ENST00000378133 2726 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms