Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN6P56747 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN6P56747 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN6P56747 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN6P56747 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN6P56747 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN6P56747 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CLDN6P56747 RAB43P1-201ENST00000561790 589 ntBASIC15.8■□□□□ 0.12
CLDN6P56747 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CLDN6P56747 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN6P56747 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN6P56747 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN6P56747 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 AC108860.2-201ENST00000562760 2183 ntBASIC15.79■□□□□ 0.12
CLDN6P56747 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN6P56747 AL021920.2-201ENST00000624828 1351 ntBASIC15.79■□□□□ 0.12
CLDN6P56747 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLDN6P56747 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 AL589987.1-201ENST00000453380 819 ntBASIC15.79■□□□□ 0.12
CLDN6P56747 RN7SL837P-201ENST00000463010 287 ntBASIC15.79■□□□□ 0.12
CLDN6P56747 RN7SL618P-201ENST00000477850 296 ntBASIC15.79■□□□□ 0.12
CLDN6P56747 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN6P56747 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN6P56747 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN6P56747 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CLDN6P56747 AL162274.1-201ENST00000617191 1098 ntBASIC15.79■□□□□ 0.12
CLDN6P56747 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN6P56747 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN6P56747 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN6P56747 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN6P56747 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN6P56747 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 AC022210.1-201ENST00000449856 793 ntBASIC15.78■□□□□ 0.12
CLDN6P56747 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN6P56747 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN6P56747 AC092552.1-201ENST00000547243 906 ntBASIC15.78■□□□□ 0.12
CLDN6P56747 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.78■□□□□ 0.12
CLDN6P56747 MIR6805-201ENST00000615055 62 ntBASIC15.78■□□□□ 0.12
CLDN6P56747 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN6P56747 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CLDN6P56747 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN6P56747 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLDN6P56747 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN6P56747 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms