Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PMS1P54277 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.17■□□□□ 0.5
PMS1P54277 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
PMS1P54277 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.16■□□□□ 0.5
PMS1P54277 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.16■□□□□ 0.5
PMS1P54277 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.16■□□□□ 0.5
PMS1P54277 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PMS1P54277 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PMS1P54277 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
PMS1P54277 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.16■□□□□ 0.5
PMS1P54277 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PMS1P54277 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.16■□□□□ 0.5
PMS1P54277 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.16■□□□□ 0.5
PMS1P54277 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 AC096734.2-201ENST00000562054 433 ntBASIC18.16■□□□□ 0.5
PMS1P54277 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.16■□□□□ 0.5
PMS1P54277 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.16■□□□□ 0.5
PMS1P54277 Z83851.2-201ENST00000609564 659 ntBASIC18.16■□□□□ 0.5
PMS1P54277 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PMS1P54277 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PMS1P54277 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PMS1P54277 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.16■□□□□ 0.5
PMS1P54277 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.16■□□□□ 0.5
PMS1P54277 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PMS1P54277 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PMS1P54277 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.16■□□□□ 0.5
PMS1P54277 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 KRT18P2-201ENST00000447938 1258 ntBASIC18.15■□□□□ 0.5
PMS1P54277 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.15■□□□□ 0.5
PMS1P54277 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 AL662844.1-201ENST00000546340 181 ntBASIC18.15■□□□□ 0.5
PMS1P54277 AC034105.1-201ENST00000563488 319 ntBASIC18.15■□□□□ 0.5
PMS1P54277 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.15■□□□□ 0.5
PMS1P54277 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.15■□□□□ 0.5
PMS1P54277 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PMS1P54277 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.15■□□□□ 0.5
PMS1P54277 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PMS1P54277 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.15■□□□□ 0.5
PMS1P54277 CDC14C-201ENST00000428251 1719 ntBASIC18.15■□□□□ 0.5
PMS1P54277 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PMS1P54277 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PMS1P54277 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.14■□□□□ 0.5
PMS1P54277 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.14■□□□□ 0.5
PMS1P54277 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.14■□□□□ 0.5
PMS1P54277 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PMS1P54277 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 AL592424.1-201ENST00000563624 1536 ntBASIC18.14■□□□□ 0.49
PMS1P54277 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PMS1P54277 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PMS1P54277 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PMS1P54277 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms