Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 GGT3P-204ENST00000453783 1664 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 AL512652.2-201ENST00000625156 1716 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.87■□□□□ 0.45
PDE6CP51160 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.87■□□□□ 0.45
PDE6CP51160 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PDE6CP51160 AP006288.1-201ENST00000446065 395 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.87■□□□□ 0.45
PDE6CP51160 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
PDE6CP51160 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 YBX1P5-201ENST00000509441 847 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 KRT19P2-202ENST00000557173 1012 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 AP001160.2-201ENST00000596071 487 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.87■□□□□ 0.45
PDE6CP51160 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.87■□□□□ 0.45
PDE6CP51160 AC134684.3-201ENST00000641758 218 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 ME2P1-201ENST00000426028 1970 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 AL031731.1-201ENST00000642131 2094 ntBASIC17.87■□□□□ 0.45
PDE6CP51160 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.87■□□□□ 0.45
PDE6CP51160 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PDE6CP51160 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.87■□□□□ 0.45
PDE6CP51160 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.86■□□□□ 0.45
PDE6CP51160 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PDE6CP51160 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.86■□□□□ 0.45
PDE6CP51160 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 ACTG1P14-201ENST00000446382 1122 ntBASIC17.86■□□□□ 0.45
PDE6CP51160 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 AL513190.1-201ENST00000621254 727 ntBASIC17.86■□□□□ 0.45
PDE6CP51160 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PDE6CP51160 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6CP51160 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6CP51160 AC092364.2-201ENST00000596710 2692 ntBASIC17.85■□□□□ 0.45
PDE6CP51160 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
PDE6CP51160 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6CP51160 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.85■□□□□ 0.45
PDE6CP51160 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms