Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.15■□□□□ 0.5
CDK7P50613 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK7P50613 AL033527.5-202ENST00000641632 1098 ntBASIC18.15■□□□□ 0.5
CDK7P50613 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 AL138688.1-201ENST00000624851 1594 ntBASIC18.15■□□□□ 0.5
CDK7P50613 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDK7P50613 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDK7P50613 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDK7P50613 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDK7P50613 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK7P50613 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK7P50613 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.15■□□□□ 0.5
CDK7P50613 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 KRT8P39-201ENST00000396270 1433 ntBASIC18.15■□□□□ 0.5
CDK7P50613 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDK7P50613 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDK7P50613 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDK7P50613 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK7P50613 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CDK7P50613 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDK7P50613 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK7P50613 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK7P50613 SERBP1P3-201ENST00000459980 809 ntBASIC18.14■□□□□ 0.49
CDK7P50613 SDHAP3-202ENST00000515467 728 ntBASIC18.14■□□□□ 0.49
CDK7P50613 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.14■□□□□ 0.49
CDK7P50613 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK7P50613 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK7P50613 AC124947.2-201ENST00000547118 1133 ntBASIC18.14■□□□□ 0.49
CDK7P50613 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK7P50613 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CDK7P50613 MIR4259-201ENST00000584466 101 ntBASIC18.14■□□□□ 0.49
CDK7P50613 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.14■□□□□ 0.49
CDK7P50613 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.14■□□□□ 0.49
CDK7P50613 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.14■□□□□ 0.49
CDK7P50613 AC004461.2-201ENST00000629517 803 ntBASIC18.14■□□□□ 0.49
CDK7P50613 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 TUBB8P12-201ENST00000308911 1335 ntBASIC18.14■□□□□ 0.49
CDK7P50613 TUBB7P-202ENST00000428444 1305 ntBASIC18.14■□□□□ 0.49
CDK7P50613 TUBB8P7-204ENST00000567960 1332 ntBASIC18.14■□□□□ 0.49
CDK7P50613 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 OR6D1P-202ENST00000641007 5290 ntBASIC18.14■□□□□ 0.49
CDK7P50613 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.14■□□□□ 0.49
CDK7P50613 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK7P50613 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK7P50613 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK7P50613 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK7P50613 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK7P50613 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDK7P50613 PCDHA12-202ENST00000613593 2588 ntBASIC18.13■□□□□ 0.49
CDK7P50613 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK7P50613 MEP1AP4-201ENST00000423244 1087 ntBASIC18.13■□□□□ 0.49
CDK7P50613 MYCLP2-201ENST00000449268 967 ntBASIC18.13■□□□□ 0.49
CDK7P50613 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.13■□□□□ 0.49
CDK7P50613 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK7P50613 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
CDK7P50613 CTBP2P3-201ENST00000585629 1255 ntBASIC18.13■□□□□ 0.49
CDK7P50613 AL512343.1-201ENST00000605837 169 ntBASIC18.13■□□□□ 0.49
CDK7P50613 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.13■□□□□ 0.49
CDK7P50613 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDK7P50613 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDK7P50613 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK7P50613 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK7P50613 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.12■□□□□ 0.49
CDK7P50613 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK7P50613 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms