Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 AC007326.2-201ENST00000624224 7579 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.79■□□□□ 0.12
PRIM2P49643 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
PRIM2P49643 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 RPS2P28-201ENST00000314255 741 ntBASIC15.78■□□□□ 0.12
PRIM2P49643 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 FAM197Y8-203ENST00000450145 560 ntBASIC15.78■□□□□ 0.12
PRIM2P49643 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.78■□□□□ 0.12
PRIM2P49643 AC136632.2-201ENST00000512891 861 ntBASIC15.78■□□□□ 0.12
PRIM2P49643 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.78■□□□□ 0.12
PRIM2P49643 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.78■□□□□ 0.12
PRIM2P49643 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.78■□□□□ 0.12
PRIM2P49643 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.78■□□□□ 0.12
PRIM2P49643 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 AL691432.3-201ENST00000621860 400 ntBASIC15.78■□□□□ 0.12
PRIM2P49643 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.78■□□□□ 0.12
PRIM2P49643 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRIM2P49643 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRIM2P49643 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.77■□□□□ 0.12
PRIM2P49643 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.77■□□□□ 0.12
PRIM2P49643 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.77■□□□□ 0.12
PRIM2P49643 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
PRIM2P49643 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PRIM2P49643 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PRIM2P49643 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PRIM2P49643 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PRIM2P49643 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.77■□□□□ 0.12
PRIM2P49643 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PRIM2P49643 KRT18P27-201ENST00000427733 1299 ntBASIC15.77■□□□□ 0.12
PRIM2P49643 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.77■□□□□ 0.12
PRIM2P49643 RPS15P9-201ENST00000494093 319 ntBASIC15.77■□□□□ 0.12
PRIM2P49643 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.77■□□□□ 0.12
PRIM2P49643 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.77■□□□□ 0.12
PRIM2P49643 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.77■□□□□ 0.12
PRIM2P49643 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
PRIM2P49643 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.77■□□□□ 0.12
PRIM2P49643 AC008735.5-201ENST00000623544 497 ntBASIC15.77■□□□□ 0.12
PRIM2P49643 TP73-AS1-207ENST00000624167 988 ntBASIC15.77■□□□□ 0.12
PRIM2P49643 PGM5P2-202ENST00000637225 1043 ntBASIC15.77■□□□□ 0.12
PRIM2P49643 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.77■□□□□ 0.12
PRIM2P49643 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.77■□□□□ 0.12
PRIM2P49643 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRIM2P49643 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRIM2P49643 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PRIM2P49643 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRIM2P49643 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRIM2P49643 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.77■□□□□ 0.11
PRIM2P49643 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms