Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.89■□□□□ 0.77
HOXA10P31260 BNIP3P42-201ENST00000454982 569 ntBASIC19.89■□□□□ 0.77
HOXA10P31260 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HOXA10P31260 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA10P31260 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA10P31260 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA10P31260 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.89■□□□□ 0.77
HOXA10P31260 AL691432.1-201ENST00000596308 1422 ntBASIC19.89■□□□□ 0.77
HOXA10P31260 BNIP3P29-201ENST00000598302 571 ntBASIC19.89■□□□□ 0.77
HOXA10P31260 AC233724.13-201ENST00000598383 410 ntBASIC19.89■□□□□ 0.77
HOXA10P31260 AC011447.5-201ENST00000616168 564 ntBASIC19.89■□□□□ 0.77
HOXA10P31260 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA10P31260 AL158212.4-201ENST00000624062 1286 ntBASIC19.89■□□□□ 0.77
HOXA10P31260 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXA10P31260 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXA10P31260 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXA10P31260 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXA10P31260 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HOXA10P31260 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA10P31260 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXA10P31260 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXA10P31260 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXA10P31260 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 AC004987.2-201ENST00000395959 1148 ntBASIC19.88■□□□□ 0.77
HOXA10P31260 KRT43P-201ENST00000434019 910 ntBASIC19.88■□□□□ 0.77
HOXA10P31260 SLC25A47P1-201ENST00000531577 414 ntBASIC19.88■□□□□ 0.77
HOXA10P31260 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HOXA10P31260 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.88■□□□□ 0.77
HOXA10P31260 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HOXA10P31260 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXA10P31260 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXA10P31260 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
HOXA10P31260 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HOXA10P31260 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HOXA10P31260 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXA10P31260 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA10P31260 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXA10P31260 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXA10P31260 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXA10P31260 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
HOXA10P31260 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 AC018665.1-201ENST00000622927 1362 ntBASIC19.87■□□□□ 0.77
HOXA10P31260 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXA10P31260 ACTG1P3-201ENST00000431775 1114 ntBASIC19.87■□□□□ 0.77
HOXA10P31260 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.87■□□□□ 0.77
HOXA10P31260 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.87■□□□□ 0.77
HOXA10P31260 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXA10P31260 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.87■□□□□ 0.77
HOXA10P31260 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HOXA10P31260 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXA10P31260 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA10P31260 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
HOXA10P31260 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA10P31260 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HOXA10P31260 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HOXA10P31260 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HOXA10P31260 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA10P31260 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXA10P31260 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXA10P31260 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.86■□□□□ 0.77
HOXA10P31260 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.86■□□□□ 0.77
HOXA10P31260 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.86■□□□□ 0.77
HOXA10P31260 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.86■□□□□ 0.77
HOXA10P31260 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXA10P31260 MIR4525-201ENST00000580000 75 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms