Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB4AP20338 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB4AP20338 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB4AP20338 AC092053.1-201ENST00000605787 1936 ntBASIC12.74□□□□□ -0.37
RAB4AP20338 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB4AP20338 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB4AP20338 POM121L4P-202ENST00000427789 1891 ntBASIC12.74□□□□□ -0.37
RAB4AP20338 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB4AP20338 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB4AP20338 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB4AP20338 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 AC005840.4-201ENST00000541242 2494 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 AC006538.1-201ENST00000567905 1585 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 MTHFR-217ENST00000641820 1569 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 BX276092.7-203ENST00000637198 1536 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB4AP20338 KRT8P47-201ENST00000604727 1398 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB4AP20338 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 FAM197Y1-201ENST00000421178 764 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.73□□□□□ -0.37
RAB4AP20338 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 AP003041.3-201ENST00000527151 707 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 AC104771.1-201ENST00000603335 964 ntBASIC12.73□□□□□ -0.37
RAB4AP20338 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RAB4AP20338 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB4AP20338 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB4AP20338 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RAB4AP20338 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms