Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL2P13500 GPAA1P2-202ENST00000606848 1787 ntBASIC14.42□□□□□ -0.1
CCL2P13500 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCL2P13500 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL2P13500 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 PCDHB19P-201ENST00000570871 2371 ntBASIC14.41□□□□□ -0.1
CCL2P13500 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 AL118508.1-201ENST00000613502 2345 ntBASIC14.41□□□□□ -0.1
CCL2P13500 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 AC002056.1-201ENST00000395613 760 ntBASIC14.41□□□□□ -0.1
CCL2P13500 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL2P13500 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 AC092474.2-201ENST00000424288 719 ntBASIC14.41□□□□□ -0.1
CCL2P13500 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.41□□□□□ -0.1
CCL2P13500 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CCL2P13500 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.41□□□□□ -0.1
CCL2P13500 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 AC016027.1-202ENST00000607927 1699 ntBASIC14.41□□□□□ -0.1
CCL2P13500 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL2P13500 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCL2P13500 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CCL2P13500 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCL2P13500 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 AC124067.4-201ENST00000519691 2379 ntBASIC14.4□□□□□ -0.1
CCL2P13500 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL2P13500 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CCL2P13500 GGT3P-204ENST00000453783 1664 ntBASIC14.4□□□□□ -0.1
CCL2P13500 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCL2P13500 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCL2P13500 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
CCL2P13500 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCL2P13500 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL2P13500 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL2P13500 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL2P13500 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.4□□□□□ -0.1
CCL2P13500 AC112482.1-201ENST00000492080 688 ntBASIC14.4□□□□□ -0.1
CCL2P13500 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL2P13500 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL2P13500 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL2P13500 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
CCL2P13500 AC099522.2-201ENST00000607001 744 ntBASIC14.4□□□□□ -0.1
CCL2P13500 AC021097.1-201ENST00000607902 574 ntBASIC14.4□□□□□ -0.1
CCL2P13500 C20orf181-201ENST00000623918 480 ntBASIC14.4□□□□□ -0.1
CCL2P13500 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL2P13500 AC092902.6-201ENST00000641783 218 ntBASIC14.4□□□□□ -0.1
CCL2P13500 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms