Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.62■□□□□ 0.41
FAM228BP0C875 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.62■□□□□ 0.41
FAM228BP0C875 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
FAM228BP0C875 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.62■□□□□ 0.41
FAM228BP0C875 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM228BP0C875 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.62■□□□□ 0.41
FAM228BP0C875 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 AC069224.1-201ENST00000566372 1715 ntBASIC17.61■□□□□ 0.41
FAM228BP0C875 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.61■□□□□ 0.41
FAM228BP0C875 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.61■□□□□ 0.41
FAM228BP0C875 AL121912.1-201ENST00000603683 238 ntBASIC17.61■□□□□ 0.41
FAM228BP0C875 PGM5P2-202ENST00000637225 1043 ntBASIC17.61■□□□□ 0.41
FAM228BP0C875 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 AL592424.1-201ENST00000563624 1536 ntBASIC17.61■□□□□ 0.41
FAM228BP0C875 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.61■□□□□ 0.41
FAM228BP0C875 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.61■□□□□ 0.41
FAM228BP0C875 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM228BP0C875 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
FAM228BP0C875 AC092384.3-202ENST00000564646 2873 ntBASIC17.6■□□□□ 0.41
FAM228BP0C875 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.6■□□□□ 0.41
FAM228BP0C875 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.6■□□□□ 0.41
FAM228BP0C875 KRT18P56-201ENST00000507275 550 ntBASIC17.6■□□□□ 0.41
FAM228BP0C875 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
FAM228BP0C875 MIR4515-201ENST00000584082 81 ntBASIC17.6■□□□□ 0.41
FAM228BP0C875 AC005593.1-201ENST00000624894 515 ntBASIC17.6■□□□□ 0.41
FAM228BP0C875 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
FAM228BP0C875 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
FAM228BP0C875 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.6■□□□□ 0.41
FAM228BP0C875 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.6■□□□□ 0.41
FAM228BP0C875 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.6■□□□□ 0.41
FAM228BP0C875 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM228BP0C875 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms