Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRGV3P03979 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 FLJ38576-201ENST00000623820 2459 ntBASIC13.03□□□□□ -0.32
TRGV3P03979 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRGV3P03979 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 RNU1-129P-201ENST00000384064 167 ntBASIC13.03□□□□□ -0.32
TRGV3P03979 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.03□□□□□ -0.32
TRGV3P03979 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.03□□□□□ -0.32
TRGV3P03979 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 U1.21-201ENST00000580816 167 ntBASIC13.03□□□□□ -0.32
TRGV3P03979 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 AL671883.3-201ENST00000603274 991 ntBASIC13.03□□□□□ -0.32
TRGV3P03979 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV3P03979 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 HLA-A-202ENST00000376806 1854 ntBASIC13.03□□□□□ -0.32
TRGV3P03979 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
TRGV3P03979 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV3P03979 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.02□□□□□ -0.32
TRGV3P03979 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
TRGV3P03979 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRGV3P03979 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TRGV3P03979 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
TRGV3P03979 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.02□□□□□ -0.32
TRGV3P03979 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.02□□□□□ -0.32
TRGV3P03979 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV3P03979 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV3P03979 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV3P03979 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
TRGV3P03979 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 PMS2P4-201ENST00000412466 1052 ntBASIC13.02□□□□□ -0.33
TRGV3P03979 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TRGV3P03979 PGAM5P1-201ENST00000518923 814 ntBASIC13.02□□□□□ -0.33
TRGV3P03979 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV3P03979 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV3P03979 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 AC021097.1-201ENST00000607902 574 ntBASIC13.02□□□□□ -0.33
TRGV3P03979 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV3P03979 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV3P03979 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV3P03979 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV3P03979 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV3P03979 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV3P03979 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
TRGV3P03979 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRGV3P03979 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV3P03979 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV3P03979 AGGF1P2-201ENST00000426656 2106 ntBASIC13.01□□□□□ -0.33
TRGV3P03979 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms