Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.61■□□□□ 0.25
RFPL1O75677 AC131009.4-201ENST00000624048 1740 ntBASIC16.61■□□□□ 0.25
RFPL1O75677 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RFPL1O75677 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL1O75677 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.6■□□□□ 0.25
RFPL1O75677 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.6■□□□□ 0.25
RFPL1O75677 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL1O75677 AC008735.5-201ENST00000623544 497 ntBASIC16.6■□□□□ 0.25
RFPL1O75677 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL1O75677 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RFPL1O75677 PCGF3-213ENST00000620529 1899 ntBASIC16.6■□□□□ 0.25
RFPL1O75677 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RFPL1O75677 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RFPL1O75677 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL1O75677 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL1O75677 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFPL1O75677 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFPL1O75677 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.59■□□□□ 0.25
RFPL1O75677 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.59■□□□□ 0.25
RFPL1O75677 UPF3AP3-201ENST00000420996 769 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RFPL1O75677 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 POU5F1P6-201ENST00000466990 990 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.59■□□□□ 0.25
RFPL1O75677 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.59■□□□□ 0.25
RFPL1O75677 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.59■□□□□ 0.25
RFPL1O75677 AC034105.1-201ENST00000563488 319 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 AC091167.2-201ENST00000579581 588 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RFPL1O75677 AC025062.2-201ENST00000605477 670 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RFPL1O75677 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RFPL1O75677 LINC01144-201ENST00000626198 1710 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RFPL1O75677 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 AC112504.1-201ENST00000623415 1841 ntBASIC16.59■□□□□ 0.25
RFPL1O75677 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL1O75677 AP005117.1-202ENST00000581724 1908 ntBASIC16.58■□□□□ 0.25
RFPL1O75677 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.58■□□□□ 0.25
RFPL1O75677 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL1O75677 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RFPL1O75677 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL1O75677 AC126177.1-201ENST00000547829 2218 ntBASIC16.58■□□□□ 0.25
RFPL1O75677 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms