Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TLR4O00206 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TLR4O00206 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.35■□□□□ 0.21
TLR4O00206 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.35■□□□□ 0.21
TLR4O00206 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TLR4O00206 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.35■□□□□ 0.21
TLR4O00206 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.35■□□□□ 0.21
TLR4O00206 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.35■□□□□ 0.21
TLR4O00206 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.35■□□□□ 0.21
TLR4O00206 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.35■□□□□ 0.21
TLR4O00206 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TLR4O00206 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR4O00206 AC100757.3-201ENST00000622361 1406 ntBASIC16.35■□□□□ 0.21
TLR4O00206 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TLR4O00206 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.34■□□□□ 0.21
TLR4O00206 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.34■□□□□ 0.21
TLR4O00206 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR4O00206 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 HLA-H-201ENST00000383620 1096 ntBASIC16.34■□□□□ 0.21
TLR4O00206 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.34■□□□□ 0.21
TLR4O00206 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.34■□□□□ 0.21
TLR4O00206 AC005034.1-201ENST00000426657 489 ntBASIC16.34■□□□□ 0.21
TLR4O00206 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR4O00206 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.34■□□□□ 0.21
TLR4O00206 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR4O00206 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
TLR4O00206 AL035252.4-201ENST00000624174 288 ntBASIC16.34■□□□□ 0.21
TLR4O00206 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.34■□□□□ 0.21
TLR4O00206 AC063926.2-201ENST00000623766 1308 ntBASIC16.34■□□□□ 0.21
TLR4O00206 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR4O00206 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TLR4O00206 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR4O00206 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR4O00206 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TLR4O00206 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TLR4O00206 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TLR4O00206 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TLR4O00206 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.33■□□□□ 0.21
TLR4O00206 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TLR4O00206 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TLR4O00206 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.33■□□□□ 0.2
TLR4O00206 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TLR4O00206 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 AC244107.1-201ENST00000442033 332 ntBASIC16.33■□□□□ 0.2
TLR4O00206 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.33■□□□□ 0.2
TLR4O00206 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.33■□□□□ 0.2
TLR4O00206 AC006277.1-201ENST00000624348 1610 ntBASIC16.33■□□□□ 0.2
TLR4O00206 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
TLR4O00206 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR4O00206 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR4O00206 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR4O00206 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
TLR4O00206 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TLR4O00206 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR4O00206 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR4O00206 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR4O00206 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms