Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
AP3B1O00203 AP001005.1-201ENST00000571755 1248 ntBASIC16.72■□□□□ 0.27
AP3B1O00203 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 AC104692.2-201ENST00000603054 253 ntBASIC16.72■□□□□ 0.27
AP3B1O00203 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
AP3B1O00203 AC098831.1-202ENST00000438821 336 ntBASIC16.71■□□□□ 0.27
AP3B1O00203 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.71■□□□□ 0.27
AP3B1O00203 UNC93B6-202ENST00000528242 690 ntBASIC16.71■□□□□ 0.27
AP3B1O00203 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.71■□□□□ 0.27
AP3B1O00203 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3B1O00203 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3B1O00203 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3B1O00203 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
AP3B1O00203 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.71■□□□□ 0.26
AP3B1O00203 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
AP3B1O00203 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AP3B1O00203 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
AP3B1O00203 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 CICP6-201ENST00000457191 2729 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
AP3B1O00203 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 REXO1L8P-201ENST00000604378 1897 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3B1O00203 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3B1O00203 MIR648-201ENST00000385046 94 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms