Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AC024909.3-201ENST00000611513 2257 ntBASIC14.59□□□□□ -0.07
NPIPB4C9JG80 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AC069224.1-201ENST00000566372 1715 ntBASIC14.59□□□□□ -0.07
NPIPB4C9JG80 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 KRT18P3-201ENST00000451602 1288 ntBASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AC002347.1-201ENST00000569543 541 ntBASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AC073389.1-201ENST00000595595 795 ntBASIC14.59□□□□□ -0.07
NPIPB4C9JG80 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB4C9JG80 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.58□□□□□ -0.07
NPIPB4C9JG80 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPB4C9JG80 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
NPIPB4C9JG80 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 PRYP6-201ENST00000514804 343 ntBASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AC140113.2-201ENST00000604370 208 ntBASIC14.58□□□□□ -0.08
NPIPB4C9JG80 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AC120114.3-201ENST00000611923 658 ntBASIC14.58□□□□□ -0.08
NPIPB4C9JG80 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AC008677.1-201ENST00000519230 1561 ntBASIC14.58□□□□□ -0.08
NPIPB4C9JG80 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AKAP8P1-201ENST00000434743 1349 ntBASIC14.58□□□□□ -0.08
NPIPB4C9JG80 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB4C9JG80 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 AL589702.1-201ENST00000641229 1509 ntBASIC14.57□□□□□ -0.08
NPIPB4C9JG80 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB4C9JG80 SLC25A1P1-201ENST00000528351 927 ntBASIC14.57□□□□□ -0.08
NPIPB4C9JG80 RARRES2P8-201ENST00000566335 367 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms