Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC023511.2-201ENST00000618803 211 ntBASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL391005.1-201ENST00000623953 2435 ntBASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 DOC2GP-204ENST00000639052 2548 ntBASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 KRT18P13-201ENST00000400056 1290 ntBASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 AP006288.1-201ENST00000446065 395 ntBASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL513523.2-202ENST00000427283 2040 ntBASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-4A0A0C4DH59 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 FAM220BP-201ENST00000377689 816 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC211486.1-202ENST00000416371 468 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC245100.5-201ENST00000452108 331 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC211476.1-201ENST00000503899 468 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 IGHV3-62-201ENST00000520057 340 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC093520.2-201ENST00000561830 333 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 MIR4321-201ENST00000592276 80 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC055717.3-201ENST00000622967 595 ntBASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-4A0A0C4DH59 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms