Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC008494.3-201ENST00000606615 944 ntBASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AC017083.2-201ENST00000608069 979 ntBASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AC007431.3-201ENST00000623221 587 ntBASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 AC020765.3-201ENST00000613051 740 ntBASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 AL162274.1-201ENST00000617191 1098 ntBASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 SLC7A15P-201ENST00000424028 1363 ntBASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 SNX33P1-201ENST00000592116 1762 ntBASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC187A0A096LP49 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 MEP1AP4-201ENST00000423244 1087 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AC093724.1-201ENST00000448659 1027 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 CHCHD2P3-201ENST00000603038 451 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AL033527.5-202ENST00000641632 1098 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AL139011.1-202ENST00000642063 584 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms